source: @ 142

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Diff Rev Age Author Log Message
(edit) @142   10 months reed reserve memory for temportary MN buffer
(edit) @141   10 months reed remove debugging info
(edit) @140   10 months reed bug fix for alignment of large sequence > 10kb
(edit) @139   10 months reed fasta format support; output file support; fixed printing of default …
(edit) @138   10 months reed all the logic associated with const_align appears to be working
(edit) @137   10 months reed more revision of unique sorting
(edit) @136   10 months reed sorting on hash working
(edit) @135   10 months reed return the ability to read sequences from stdin on '-'
(edit) @134   10 months reed more work on hash sorting
(edit) @133   10 months reed conversion of seq_db to boost::multi_index
(edit) @132   10 months reed sorting work
(edit) @131   10 months reed more sort work
(edit) @130   10 months reed start of seq_sort
(edit) @129   11 months reed support for releng scripts
(edit) @128   11 months reed saner order for --pairs=all
(edit) @127   11 months reed for zeta and geo models default to give a zero cost to identical sequences …
(edit) @126   12 months reed remove unneeded files
(edit) @125   12 months reed first stage of shifting ngila to cmake compilation
(edit) @124   20 months reed added cstring header, just in case
(edit) @123   3 years reed rolling 1.2.1 release
(edit) @122   3 years reed fixed sequence names not truncated bug
(edit) @121   3 years reed fixed bug when space is in fasta name
(edit) @120   3 years reed tag 1.2-release
(edit) @119   3 years reed configure bugfix
(edit) @118   3 years reed updated config.guess and config.sub
(edit) @117   3 years reed doc bug fix
(edit) @116   3 years reed more 1.2 prep
(edit) @115   3 years reed backporting 1.2 chanes to current
(edit) @114   3 years reed preparing 1.2
(edit) @113   3 years reed distcheck passed
(edit) @112   3 years reed CERRORR created
(edit) @111   3 years reed ngila man pages
(edit) @110   3 years reed ngila man pages
(edit) @109   3 years reed case insensitivity
(edit) @108   3 years reed pairs setting added
(edit) @107   3 years reed bug fix
(edit) @106   3 years reed bugfix
(edit) @105   3 years reed bugfix
(edit) @104   3 years reed fixed bug introduced in new code
(edit) @103   3 years reed bug fixes
(edit) @102   3 years reed bugfixes
(edit) @101   3 years reed bugfix
(edit) @100   3 years reed multi aln bugfix
(edit) @99   3 years reed xm.h header porting changes
(edit) @98   3 years reed dc algorithm converted
(edit) @97   3 years reed remove gaps in sequence
(edit) @96   3 years reed all possible aligned pairs
(edit) @95   3 years reed offset function
(edit) @94   3 years reed added zeta_model geo_model
(edit) @93   3 years reed clustal alignment output
(edit) @92   3 years reed bug fix
(edit) @91   3 years reed bug fix
(edit) @90   3 years reed
(edit) @89   3 years reed added version info again
(edit) @88   3 years reed ngila aligner class works
(edit) @87   3 years reed
(edit) @86   3 years reed added model to ngila_app
(edit) @85   3 years reed added models.h and models.cpp updated X-Macros
(edit) @84   3 years reed seqparser support for stdin
(edit) @83   3 years reed matparser support for '-'
(edit) @82   3 years reed new CERROR function seqparser cleanup
(edit) @81   3 years reed matparser case insensitivity
(edit) @80   3 years reed added new spirit parsers removed outdated files
(edit) @79   3 years reed
(edit) @78   3 years reed mat parser and xmacros stuff
(edit) @77   3 years reed matrix parser
(edit) @76   3 years reed new parser work
(edit) @75   3 years reed more ngila stuff
(edit) @74   3 years reed updated some copyright notices
(edit) @73   3 years reed added xmacros
(edit) @72   3 years reed updated configure and makefile for transition to 1.2
(edit) @71   3 years reed updated configure and makefile for transition to 1.1
(edit) @70   3 years reed bugfix for windows binary
(edit) @69   4 years reed 1.1 branding
(edit) @68   4 years reed 1.1 tagging start
(edit) @67   4 years reed Removed ngilag
(edit) @66   4 years reed Fixed bug with holistic align
(edit) @65   4 years reed Fixed bug with reading clustal files
(edit) @64   4 years reed added end gap parameters
(edit) @63   4 years reed Branding 1.0
(edit) @62   4 years reed Created 1.0 Branch
(edit) @61   4 years reed preparing release 1.0
(edit) @60   4 years reed FreeEnds? now only works for the smaller sequence Added O(MN) algorithm.
(edit) @59   4 years reed
(edit) @58   5 years reed
(edit) @57   5 years reed man page
(edit) @56   5 years reed
(edit) @55   5 years reed nomsg
(edit) @54   5 years reed
(edit) @53   5 years reed
(edit) @52   5 years reed
(edit) @51   5 years reed
(edit) @50   5 years reed
(edit) @49   5 years reed
(edit) @48   5 years reed
(edit) @47   5 years reed distcheck passed
(edit) @46   5 years reed
(edit) @45   5 years reed
(edit) @44   5 years reed
(edit) @43   5 years reed added tests
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