Version 1.1

• Compilation error on cygwin. Use the following bugfix patch.

  --- src/dawg.cc.old	2007-11-15 19:44:31.454400000 -0500
  +++ src/dawg.cc	2007-11-15 19:44:50.377200000 -0500
  @@ -332,7 +332,7 @@
   		for(unsigned int u=0;u<4;++u)
   			vuSeed.push_back(rand_seed());
   	}
  -	mt_srand(&vuSeed[0], vuSeed.size());
  +	mt_srand((uint32_t*)&vuSeed[0], vuSeed.size()*sizeof(uint32_t)/sizeof(unsigned int));
   	
   	// Setup recombinant tree
   	Tree myTree;
  

Version 1.0

• Large deletions (relative to sequence length) may cause Dawg to crash. This affects release-1.0 but has been fixed in current.
• Certain types of recombinant trees may also cause Dawg to crash. This affects release-1.0 but has been fixed in current